BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018F12LP1|AL427362
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1503 0.0
>3x_Contig1802
Length = 45229
Score = 1503 bits (752), Expect = 0.0
Identities = 855/881 (97%), Gaps = 13/881 (1%)
Strand = Plus / Minus
Query: 4 atsaaagtcttaatacattctagaatctggaccatacatggtgtttcccctcgtcaagaa 63
|| |||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||
Sbjct: 8547 atcaaagtcttaatacattctagaatctg-accatacatggtgtttcccctc-tcaa-aa 8491
Query: 64 atttttgttaaccatacaaaccagtcttccttatcctggagcgcaaaatccgtyagaata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 8490 atttttgttaaccatacaaaccagtcttccttatcctggagcgcaaaatccgtcagaata 8431
Query: 124 gttactgctcctcgtagattcwaatwatttgtatcaggactttccattaaaattttgagt 183
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 8430 gttactgctcctcgtagattcaaataatttgtatcaggactttccattaaaattttgagt 8371
Query: 184 tgatacgcaaattgatcccagtatttggattcgattaaagcgtccaaggttttcaatagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8370 tgatacgcaaattgatcccagtatttggattcgattaaagcgtccaaggttttcaatagc 8311
Query: 244 tgttggtatgaatttattatccgagagttagatggccctctgttatcaaataggctaggt 303
||||||| |||||||||||||| || ||| ||||||| |||||||||||||||||||||
Sbjct: 8310 tgttggt-tgaatttattatccaag--tta-atggccc-ctgttatcaaataggctaggt 8256
Query: 304 cataagtggattggtcagaaatatcctcatgctctgtactgattatagatattaattgta 363
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 8255 cataagtggattggtcagaaatatcctcatgctctgtactgatta-agatattaattgta 8197
Query: 364 tggaagcaacagagtagacacttctgcggcttggtgtcttttgtgcgcaatgaattatca 423
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8196 tggaagcaacagagtaga-acttctg-ggcttggtgtcttttgtgcgcaatgaattatca 8139
Query: 424 taccaagtccatctaccgtaagtgttgaattacggagacaattattcaaaaacgataaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8138 taccaagtccatctaccgtaagtgttgaattacggagacaattattcaaaaacgataaaa 8079
Query: 484 acgaaatacaggttctggtatctgaagtttaaratatttgawagggataagctcaataac 543
||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||
Sbjct: 8078 acgaaatacaggttctggtat-tgaagtttaaaatatttgaaagggataagctcaataac 8020
Query: 544 tgtgaratattcatagtcgcgtgttgttcgaaaatcacaatatcagtaccctgatgggtc 603
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8019 tgtgaaatattcatagtcgcgtgttgttcgaaaatcacaatatcagtaccctgatgggtc 7960
Query: 604 aaaccgtcaatgccattgaraattaggtctagagatgaatcaagcgcacgcacggttcaa 663
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 7959 aaaccgtcaatgccattgaaaattaggtctagagatgaatcaagcg-acgcacggttcaa 7901
Query: 664 agtaatcttatctcccatgacgcagcagaagtcaataagcgtaaaatagaacatgagtct 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7900 agtaatcttatctcccatgacgcagcagaagtcaataagcgtaaaatagaacatgagtct 7841
Query: 724 cactgaatgctcattaccacaatgcagacaacatttcgacmatcattccaggagcatacg 783
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 7840 cactgaatgctcattaccacaatgcagacaacatttcgacaataattccaggagcatacg 7781
Query: 784 tgattycgtattatccacgtctcttttcagcaaagaagtagccttcacccagatcaatgg 843
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7780 tgattccgtattatccacgtctcttttcagcaaagaagtagccttcacccagatcaatgg 7721
Query: 844 tatctcactcttctcgtacttatcaatattatcggkgatgt 884
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 7720 tatctcactcttctcgtacttatcaatattatcggtgatgt 7680
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5051
Number of Sequences: 1807
Number of extensions: 5051
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)